Survival-associated eQTLs across different cancer types
We identified 22,212 eQTLs associated with patient overall survival across different cancer types at FDR < 0.05.
|
Cancer type
|
SNP ID
|
SNP position (hg19)
|
Alleles (A/a)
|
log-rank test p-value
|
Sample size
|
Median survival time AA
|
Median survival time Aa
|
Median survival time aa
|
|
|---|---|---|---|---|---|---|---|---|---|
| KIRP | rs58844095 | chr19:40468544 | G/A | 1.92E-8 | 211 | 16.53 | 13.82 | 4.62 | KM Plot |
| KIRP | rs59012219 | chr4:76583686 | G/A | 0.000125 | 213 | 14.53 | 17.03 | 18.03 | KM Plot |
| KIRP | rs59038611 | chr16:90065956 | G/C | 1.66E-6 | 203 | 17.02 | 12.05 | 9.77 | KM Plot |
| KIRP | rs59054554 | chr4:76560335 | G/C | 5.04E-5 | 211 | 14.53 | 17.03 | 18.03 | KM Plot |
| KIRP | rs59115636 | chr11:34794686 | A/G | 0 | 214 | 15.2 | 17.73 | 3.83 | KM Plot |
| KIRP | rs59117994 | chr5:79926340 | T/C | 0.000105 | 213 | 19.3 | 14.83 | 9.77 | KM Plot |
| KIRP | rs59233020 | chr3:99944694 | T/G | 3.3E-8 | 212 | 16.45 | 19.6 | 4.37 | KM Plot |
| KIRP | rs59339716 | chr18:3303164 | CT/C | 0.000463 | 205 | 15.07 | 17.03 | 11.43 | KM Plot |
| KIRP | rs59568566 | chr4:76603248 | T/C | 8.55E-5 | 211 | 14.32 | 17.12 | 16.43 | KM Plot |
| KIRP | rs59607670 | chr10:75594759 | T/TA | 0 | 213 | 14.53 | 19.62 | 4.82 | KM Plot |
| KIRP | rs59779961 | chr20:25985947 | G/A | 7.31E-9 | 207 | 18.65 | 13.38 | 1.17 | KM Plot |
| KIRP | rs59798077 | chr1:212674284 | C/T | 5.6E-5 | 211 | 17 | 9 | 2.07 | KM Plot |
| KIRP | rs59825837 | chr19:16543445 | T/C | 2.62E-11 | 214 | 16.5 | 13.1 | 8.08 | KM Plot |
| KIRP | rs59827489 | chr10:63364965 | T/C | 0 | 214 | 18.25 | 10.23 | 1.17 | KM Plot |
| KIRP | rs59828224 | chr5:79952856 | C/CTA | 0.000105 | 212 | 18.65 | 14.85 | 10.3 | KM Plot |